STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlaBPFAM: KR domain protein; Acyl transferase; short- chain dehydrogenase/reductase SDR; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; alpha/beta hydrolase fold; Alcohol dehydrogenase zinc-binding domain protein; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase. (3045 aa)    
Predicted Functional Partners:
Hoch_1367
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
 0.999
Hoch_1750
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; aminotransferase class-III; Acyl transferase; Luciferase-like, subgroup; phosphopantetheine- binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein.
 
 
0.999
hlaA
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; condensation domain protein; KR domain protein; Acyl transferase; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: mxa:MXAN_4526 polyketide synthase type I.
 
 
0.998
Hoch_2957
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; condensation domain protein; KR domain protein; Acyl transferase; phosphopantetheine-binding; KEGG: eca:ECA0602 type I polyketide synthase.
 
 
0.997
Hoch_6170
TIGRFAM: thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; Male sterility domain; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: scl:sce8262 non-ribosomal peptide synthetase.
 0.997
Hoch_1312
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; aminotransferase class-III; Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; phosphopantetheine-binding; KEGG: pfo:Pfl01_1845 peptide synthase.
 
 0.996
Hoch_1748
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: avn:Avin_25570 non-ribosomal peptide synthase, PvdD/PvdJ-like protein.
 
 
 0.995
Hoch_5652
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: glo:Glov_1938 malonyl CoA-acyl carrier protein transacylase.
  
0.994
Hoch_1749
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: eca:ECA1487 non-ribosomal peptide synthetase.
 
 0.993
Hoch_1077
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase.
 
 0.991
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.