STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_0824KEGG: mxa:MXAN_1883 hypothetical protein. (879 aa)    
Predicted Functional Partners:
Hoch_0823
Hypothetical protein.
       0.773
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.580
Hoch_4507
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.578
Hoch_0895
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.507
Hoch_0959
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.505
Hoch_0771
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.501
Hoch_1217
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.501
Hoch_0818
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.499
Hoch_0707
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.498
Hoch_1033
KEGG: mxa:MXAN_1885 putative bacteriophage related protein.
 
     0.498
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.