STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_0841KEGG: mxa:MXAN_1860 hypothetical protein. (209 aa)    
Predicted Functional Partners:
Hoch_0840
KEGG: mxa:MXAN_1861 hypothetical protein.
       0.776
Hoch_0842
KEGG: mxa:MXAN_1859 hypothetical protein.
       0.776
Hoch_0843
KEGG: mxa:MXAN_1856 hypothetical protein.
       0.776
Hoch_0844
PFAM: cell surface receptor IPT/TIG domain protein; KEGG: mxa:MXAN_1855 IPT/TIG domain-containing protein.
       0.776
Hoch_0845
Phage tail sheath protein FI-like protein; KEGG: mxa:MXAN_1853 heme-binding protein.
       0.773
Hoch_0846
TIGRFAM: conserved hypothetical protein; PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_1851 phage tail region protein.
       0.770
Hoch_0847
KEGG: mxa:MXAN_1850 hypothetical protein.
       0.756
Hoch_0839
Hypothetical protein; KEGG: mxa:MXAN_1862 phage-like element pbsx protein xkdg.
       0.737
Hoch_0833
Hypothetical protein.
       0.637
Hoch_0834
TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: mxa:MXAN_1868 PBSX family phage portal protein.
       0.637
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.