STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_1370PFAM: FAD dependent oxidoreductase; KEGG: plu:plu3567 hypothetical protein. (491 aa)    
Predicted Functional Partners:
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 
 0.945
Hoch_1369
PFAM: Methyltransferase type 11; protein of unknown function DUF343; KEGG: similar to CG11596 CG11596-PA.
 
     0.895
Hoch_1367
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
  
  
 0.797
Hoch_1371
TIGRFAM: chorismate mutase related enzymes; PFAM: Chorismate mutase; KEGG: plu:plu3564 hypothetical protein.
  
    0.775
Hoch_2352
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mxa:MXAN_0181 hypothetical protein.
  
 
 0.773
Hoch_5667
KEGG: scl:sce1566 hypothetical protein.
  
     0.739
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.699
Hoch_1368
PFAM: Prephenate dehydrogenase; KEGG: plu:plu3562 hypothetical protein.
       0.689
Hoch_3050
PFAM: protein of unknown function DUF879; KEGG: vcj:VCD_000134 protein ImpG/VasA.
  
     0.662
Hoch_1372
PFAM: Phytanoyl-CoA dioxygenase; KEGG: hypothetical protein.
  
 
 0.645
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.