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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_1663PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: shl:Shal_2146 acyl-CoA dehydrogenase domain- containing protein. (387 aa)    
Predicted Functional Partners:
Hoch_1662
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7799 putative acyl-CoA dehydrogenase.
     0.994
Hoch_2702
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pol:Bpro_3845 acyl-CoA dehydrogenase-like.
 
     0.972
Hoch_1666
PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll2948 acyl-CoA synthetase.
 
 
  0.900
Hoch_1660
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: dar:Daro_2350 multifunctional fatty acid oxidation complex subunit alpha.
  
 0.876
Hoch_1665
KEGG: hypothetical protein.
 
     0.837
Hoch_3456
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_5371 multifunctional fatty acid oxidation complex subunit alpha.
  
 0.836
Hoch_1664
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rec:RHECIAT_PC0000920 putative aryl-alcohol dehydrogenase protein.
 
 
 0.829
hliR
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: afw:Anae109_2137 acyl-CoA dehydrogenase domain-containing protein.
  
     0.745
Hoch_1661
KEGG: noc:Noc_1610 hypothetical protein.
 
     0.744
Hoch_1658
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bte:BTH_I0062 fatty oxidation complex, alpha subunit.
  
 0.741
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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