STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_1711Serine/threonine protein kinase; PFAM: protein of unknown function DUF323; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce0682 protein kinase. (1043 aa)    
Predicted Functional Partners:
Hoch_2062
PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: afw:Anae109_0119 protein kinase.
  
    0.767
Hoch_1210
PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_5176 serine/threonine protein kinase.
  
    0.763
Hoch_3494
Serine/threonine protein kinase; PFAM: response regulator receiver; SMART: serine/threonine protein kinase; response regulator receiver; KEGG: scl:sce2313 protein kinase.
  
    0.762
Hoch_1605
PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: ade:Adeh_2796 serine/threonine protein kinase.
  
    0.736
Hoch_1271
PFAM: WD40 repeat, subgroup; tyrosine protein kinase; SMART: serine/threonine protein kinase; WD-40 repeat protein; KEGG: scl:sce3386 protein kinase.
  
    0.735
Hoch_6388
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce7353 protein kinase.
  
    0.730
Hoch_0426
SMART: serine/threonine protein kinase; KEGG: scl:sce0848 protein kinase.
  
    0.712
Hoch_3763
PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: afw:Anae109_0119 protein kinase.
 
  
 0.627
Hoch_0502
PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce5013 protein kinase.
  
    0.548
Hoch_1712
PFAM: Erythromycin esterase; KEGG: bxe:Bxe_C1280 protein-L-isoaspartate (D- aspartate) O-methyltransferase.
  
    0.489
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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