STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_1758Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: hypothetical protein; K00681 gamma- glutamyltranspeptidase. (545 aa)    
Predicted Functional Partners:
gshB
KEGG: scl:sce7568 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase domain protein; Belongs to the prokaryotic GSH synthase family.
    
 0.911
Hoch_6440
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; Hydantoinase/oxoprolinase; KEGG: bur:Bcep18194_B2574 5-oxoprolinase (ATP- hydrolyzing).
    
 0.910
Hoch_5382
Peroxiredoxin; PFAM: glutathione peroxidase; KEGG: pmy:Pmen_3641 peroxiredoxin; Belongs to the glutathione peroxidase family.
     
 0.909
Hoch_5726
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
     
 0.909
Hoch_5783
PFAM: glutamate--cysteine ligase GCS2; KEGG: eba:ebA6981 glutamate--cysteine ligase.
    
 0.909
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.904
Hoch_0148
PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: tgr:Tgr7_1858 leucyl aminopeptidase; Belongs to the peptidase M17 family.
     
 0.904
Hoch_5408
PFAM: Peptidase M1 membrane alanine aminopeptidase; PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein; KEGG: mxa:MXAN_0644 M1 family peptidase.
     
 0.903
Hoch_6749
PFAM: Pyridoxal-dependent decarboxylase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gme:Gmet_1644 pyridoxal-dependent decarboxylase.
     
 0.903
Hoch_4554
PFAM: aminotransferase class-III; KEGG: kpn:KPN_00577 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.901
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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