STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_2000TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: aeh:Mlg_1564 carbon monoxide dehydrogenase, large subunit apoprotein. (790 aa)    
Predicted Functional Partners:
Hoch_2001
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO6030 carbon-monoxide dehydrogenase small subunit.
 
 0.996
Hoch_2568
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: pla:Plav_2962 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.987
Hoch_1361
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: reh:H16_B0745 4-hydroxybenzoyl-CoA reductase, 2Fe-2S iron-sulfur cluster subunit C.
 
 0.965
Hoch_5970
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sfu:Sfum_2011 (2Fe-2S)-binding domain protein.
 
 0.963
Hoch_0273
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mxa:MXAN_4830 isoquinoline 1-oxidoreductase, alpha subunit.
 
 
 0.939
Hoch_2002
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A2144 carbon monoxide dehydrogenase, medium subunit.
 
 0.915
Hoch_5969
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: scl:sce5893 putative xanthine dehydrogenase.
 
 0.889
Hoch_2566
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bbt:BBta_1911 putative carbon monoxide dehydrogenase medium subunit, CoxM-like protein.
 
 
 0.860
Hoch_1360
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: reh:H16_B0744 4-hydroxybenzoyl-CoA reductase, FAD-binding subunit B.
 
 0.856
Hoch_4400
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: smt:Smal_1993 putative xanthine dehydrogenase iron-sulfur-binding subunit.
 
 0.838
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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