STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_2199PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_0242 hypothetical protein. (289 aa)    
Predicted Functional Partners:
Hoch_0517
PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_1944 glycosyl transferase, group 2 family protein.
 
     0.746
Hoch_0422
PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_2588 dolichyl-phosphate beta-D- mannosyltransferase.
 
     0.609
Hoch_3626
PFAM: glycosyl transferase family 2; KEGG: hch:HCH_06165 cell wall biosynthesis glycosyltransferase.
 
     0.558
Hoch_2264
PFAM: glycosyl transferase family 2; KEGG: noc:Noc_2168 glycosyl transferase family protein.
 
  
 0.536
Hoch_2198
PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: mxa:MXAN_6852 ATP-dependent protease La.
       0.456
Hoch_1849
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN0575 NAD-dependent epimerase/dehydratase family protein.
 
  
 0.451
Hoch_0296
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: pcr:Pcryo_0617 NAD-dependent epimerase/dehydratase.
 
    0.446
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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