STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_2415KEGG: scl:sce7587 hypothetical protein. (499 aa)    
Predicted Functional Partners:
Hoch_2413
KEGG: scl:sce7585 molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 
 0.993
Hoch_2713
KEGG: scl:sce4516 putative oxidoreductase, iron- sulfur binding.
 
 
 0.983
Hoch_2416
KEGG: scl:sce7589 hypothetical protein.
 
 
 0.954
Hoch_2412
KEGG: scl:sce7584 cytochrome c family protein.
 
 
 
 0.947
Hoch_2414
PFAM: Polysulphide reductase NrfD; KEGG: scl:sce7586 hypothetical protein.
 
 
 0.946
Hoch_2418
Protein SCO1; KEGG: afw:Anae109_0847 SCO1/SenC family protein.
 
  
 0.910
Hoch_2421
PFAM: cytochrome c oxidase subunit III; KEGG: ade:Adeh_2273 cytochrome c oxidase, subunit III.
 
 
 0.886
Hoch_2714
KEGG: ade:Adeh_0795 hypothetical protein.
 
 
 
 0.860
Hoch_2712
PFAM: Polysulphide reductase NrfD; KEGG: scl:sce4517 hypothetical protein.
 
 
 
 0.858
Hoch_2419
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.850
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.