STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_2502KEGG: scl:sce6497 hypothetical protein. (545 aa)    
Predicted Functional Partners:
Hoch_5731
Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.648
Hoch_5484
Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.609
Hoch_5233
PFAM: Protein of unknown function DUF2253, membrane; KEGG: ppf:Pput_1402 hypothetical protein.
  
     0.537
Hoch_2501
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; Tetratricopeptide repeat; KEGG: scl:sce8649 protein kinase.
  
    0.527
Hoch_3062
PFAM: Spore coat protein CotH; KEGG: scl:sce4861 hypothetical protein.
  
     0.527
Hoch_0033
PFAM: Spore coat protein CotH; KEGG: afw:Anae109_3499 spore coat protein CotH.
  
     0.526
Hoch_0458
PFAM: amidohydrolase; WD40 domain protein beta Propeller; peptidase S9B dipeptidylpeptidase IV domain protein; Amidohydrolase 3; KEGG: mxa:MXAN_0075 WD-40-like repeat-containing amidohydrolase.
  
     0.507
Hoch_5348
PFAM: peptidase M36 fungalysin; KEGG: scl:sce4631 extracellular elastinolytic metalloproteinase precursor.
  
 
   0.485
Hoch_1603
SMART: PDZ/DHR/GLGF domain protein; KEGG: mxa:MXAN_6217 hypothetical protein.
  
  0.469
Hoch_1323
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: hypothetical protein.
  
 0.449
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.