STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_3776TIGRFAM: TonB family protein; KEGG: mxa:MXAN_3377 FHA/TonB domain-containing protein. (293 aa)    
Predicted Functional Partners:
Hoch_3775
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mxa:MXAN_3795 acyl-CoA dehydrogenase.
       0.773
Hoch_3777
Hypothetical protein.
       0.773
Hoch_3778
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mxa:MXAN_3797 acyl-CoA dehydrogenase.
       0.773
Hoch_3773
PFAM: Cupin 2 conserved barrel domain protein; KEGG: scl:sce8902 hypothetical protein.
       0.732
Hoch_3774
PFAM: cobalamin B12-binding domain protein; KEGG: ade:Adeh_1832 methylmalonyl-CoA mutase.
       0.732
Hoch_3779
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: geo:Geob_0245 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.642
Hoch_3772
TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: afw:Anae109_2160 LAO/AO transport system ATPase.
       0.630
Hoch_3780
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: afw:Anae109_2134 3-hydroxybutyryl-CoA dehydrogenase.
       0.437
Hoch_3781
KEGG: acp:A2cp1_1594 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.437
Hoch_3771
Hypothetical protein.
       0.414
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.