STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_3838PFAM: asparagine synthase; KEGG: sme:SM_b20652 putative asparagine synthetase protein. (621 aa)    
Predicted Functional Partners:
Hoch_5687
PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: bcm:Bcenmc03_5645 asparagine synthase (glutamine-hydrolyzing).
  
  
  0.953
argG
KEGG: hha:Hhal_0725 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.915
pyrB
KEGG: pca:Pcar_1615 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.914
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.913
Hoch_1778
L-asparaginase, type I; KEGG: lpp:lpp2932 hypothetical protein; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase.
     
 0.909
purA-2
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.909
Hoch_0724
PFAM: peptidase T2 asparaginase 2; KEGG: scl:sce3769 putative L-asparaginase.
     
 0.908
Hoch_4968
PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gur:Gura_2501 aminotransferase, class I and II.
     
 0.903
Hoch_5530
PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ank:AnaeK_1558 aminotransferase class I and II.
     
 0.903
Hoch_1427
PFAM: asparagine synthase; KEGG: smt:Smal_2051 asparagine synthase.
     
  0.900
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.