STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_4372KEGG: bra:BRADO6790 alpha/beta family hydrolase. (270 aa)    
Predicted Functional Partners:
Hoch_5224
TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: scl:sce1061 enoyl-CoA hydratase.
 
 
 0.776
Hoch_5225
TIGRFAM: benzoyl-CoA oxygenase, B subunit; KEGG: scl:sce1060 isomerases acting on hydroxy acids and derivatives.
  
    0.765
Hoch_2125
PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_6949 feruloyl-CoA synthase.
 
 
 
 0.710
Hoch_6534
TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: azo:azo3052 benzoate-coa ligase.
  
   
 0.629
Hoch_4371
PFAM: 4'-phosphopantetheinyl transferase; KEGG: mxa:MXAN_3485 putative 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.550
hlaB
PFAM: KR domain protein; Acyl transferase; short- chain dehydrogenase/reductase SDR; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; alpha/beta hydrolase fold; Alcohol dehydrogenase zinc-binding domain protein; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase.
  
 
 0.543
hliT
PFAM: Acyl transferase; KR domain protein; Beta- ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_4526 polyketide synthase type I.
  
 
 0.543
Hoch_3833
PFAM: beta-lactamase domain protein; KEGG: rso:RS04774 hypothetical protein.
  
    0.515
Hoch_5092
TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce1995 acyl-CoA synthetase.
  
   
 0.496
Hoch_1750
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; aminotransferase class-III; Acyl transferase; Luciferase-like, subgroup; phosphopantetheine- binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein.
  
 
 0.450
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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