STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_4458PFAM: CBS domain containing protein; glutamate-- cysteine ligase GCS2; SMART: CBS domain containing protein; KEGG: scl:sce0051 hypothetical protein. (640 aa)    
Predicted Functional Partners:
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.795
Hoch_5063
KEGG: hch:HCH_00351 hypothetical protein.
 
     0.641
Hoch_3785
PFAM: glutamine amidotransferase class-I; KEGG: mxa:MXAN_5631 class I glutamine amidotransferase family protein.
  
  
 0.435
Hoch_3112
PFAM: histone deacetylase superfamily; KEGG: ppg:PputGB1_5389 histone deacetylase superfamily protein.
  
    0.430
Hoch_4049
PFAM: histone deacetylase superfamily; KEGG: scl:sce6159 histone deacetylase family protein.
  
    0.430
Hoch_5329
PFAM: histone deacetylase superfamily; KEGG: ank:AnaeK_3472 histone deacetylase superfamily.
  
    0.430
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.