STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_4460Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: scl:sce4318 cAMP-binding protein transcriptional regulatory protein. (171 aa)    
Predicted Functional Partners:
Hoch_1844
Adenylate/guanylate cyclase with integral membrane sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; KEGG: bba:Bd1116 adenylate cyclase.
 
  0.774
Hoch_4459
Hypothetical protein.
       0.773
Hoch_3368
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mxa:MXAN_3837 cyclic nucleotide-binding domain-containing protein.
  
     0.772
Hoch_2081
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: scl:sce7185 cAMP phosphodiesterase.
  
   
 0.760
Hoch_4571
Adenylate/guanylate cyclase with GAF sensor and FHA domain protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; Forkhead-associated protein; GAF domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; Forkhead-associated protein; GAF domain protein; KEGG: mxa:MXAN_3956 putative adenylate cyclase.
 
 0.746
Hoch_1697
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide- binding; KEGG: mxa:MXAN_5125 transcriptional regulator MrpC.
  
   
 0.640
Hoch_0405
Adenylate/guanylate cyclase with TPR repeats; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide repeat; KEGG: smd:Smed_3612 adenylyl cyclase class- 3/4/guanylyl cyclase.
 
 0.577
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
     
 0.557
Hoch_3722
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; Tetratricopeptide TPR_2 repeat protein; SMART: cyclic nucleotide-binding; KEGG: mxa:MXAN_3837 cyclic nucleotide-binding domain-containing protein.
  
     0.542
Hoch_4462
Hypothetical protein.
       0.512
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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