STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_4885PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: reh:H16_A2458 putative acyl-CoA dehydrogenase. (413 aa)    
Predicted Functional Partners:
Hoch_4886
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bph:Bphy_4071 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.952
Hoch_4884
PFAM: Endoribonuclease L-PSP; KEGG: azo:azo1928 hypothetical protein.
 
 
   0.946
Hoch_4889
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: hch:HCH_06122 acyl-CoA dehydrogenase.
 
  
 
0.946
Hoch_1657
KEGG: pla:Plav_0464 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
Hoch_3455
acetyl-CoA acetyltransferase; KEGG: eck:EC55989_2586 beta-ketoacyl-CoA thiolase, anaerobic, subunit; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
Hoch_3781
KEGG: acp:A2cp1_1594 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
Hoch_4603
KEGG: zgc:56036; K07508 acetyl-CoA acyltransferase 2; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
Hoch_4631
KEGG: scl:sce7652 Acetyl-CoA acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
Hoch_6698
KEGG: scl:sce7554 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
Hoch_1658
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bte:BTH_I0062 fatty oxidation complex, alpha subunit.
  
 0.885
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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