STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5080KEGG: bte:BTH_II1007 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein. (677 aa)    
Predicted Functional Partners:
Hoch_1357
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_3401 response regulator receiver protein.
 
 
   0.802
Hoch_4791
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bph:Bphy_1144 response regulator receiver protein.
 
   0.802
Hoch_4644
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mmb:Mmol_0127 response regulator receiver protein.
  
 0.793
Hoch_5796
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bte:BTH_II1008 response regulator.
 
     0.779
Hoch_4440
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pha:PSHAa2395 two-component response regulator.
 
   
 0.777
Hoch_4725
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rlg:Rleg_0315 response regulator receiver protein.
 
 
   0.777
Hoch_5079
SMART: Integrin alpha beta-propellor repeat protein; KEGG: sde:Sde_2598 PAS/PAC sensor signal transduction histidine kinase.
       0.603
Hoch_2452
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dia:Dtpsy_0629 response regulator receiver sensor signal transduction histidine kinase.
  
 
   0.602
Hoch_3427
MCP methyltransferase, CheR-type with PAS/PAC sensor; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 
0.586
Hoch_5872
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; KEGG: mxa:MXAN_1077 sensory box histidine kinase.
  
 
   0.585
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.