STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5280Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sat:SYN_01077 sensor proteinluxq. (699 aa)    
Predicted Functional Partners:
Hoch_4809
Response regulator receiver protein; KEGG: dal:Dalk_3917 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 0.972
Hoch_2076
GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: bja:bll2599 two-component hybrid sensor and regulator.
 
 
0.945
Hoch_5056
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pin:Ping_0978 response regulator receiver modulated diguanylate cyclase.
 
 
 0.890
Hoch_0280
PFAM: response regulator receiver; SMART: response regulator receiver; GGDEF domain containing protein; KEGG: pin:Ping_0978 response regulator receiver modulated diguanylate cyclase.
 
 0.887
Hoch_1794
KEGG: glo:Glov_1549 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein.
 
 
0.865
Hoch_4952
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: scl:sce3649 hypothetical protein.
 
 0.842
Hoch_6875
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rfr:Rfer_3778 response regulator receiver domain-containing protein.
 
 
 0.837
Hoch_5999
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afw:Anae109_3956 response regulator receiver protein.
 
 
 0.833
Hoch_5910
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afw:Anae109_1134 response regulator receiver protein.
 
 
 0.829
Hoch_0268
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; Helix-turn-helix type 11 domain protein; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: scl:sce4878 two-component response regulator.
 
 
 0.818
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.