STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5306PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: scl:sce8427 phosphoserine phosphatase. (715 aa)    
Predicted Functional Partners:
Hoch_4443
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1431 anti-anti-sigma factor family protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.802
Hoch_0208
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: scl:sce0880 putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.784
Hoch_4441
Protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation E family protein; GAF domain protein; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: dal:Dalk_2462 protein serine/threonine phosphatase.
 
 
0.735
Hoch_1794
KEGG: glo:Glov_1549 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein.
 
  
 0.734
Hoch_0209
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: scl:sce0881 anti-sigma factor.
 
 
 0.697
Hoch_2554
Multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: nmu:Nmul_A2694 multi-sensor hybrid histidine kinase.
 
  
 0.697
Hoch_5307
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mxa:MXAN_2715 endonuclease/exonuclease/phosphatase family protein.
  
    0.550
Hoch_0058
KEGG: eba:p2A350 FO synthase; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
   
    0.532
Hoch_0059
TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; PFAM: Radical SAM domain protein; KEGG: cps:CPS_4048 hypothetical protein.
   
    0.532
Hoch_5444
KEGG: scl:sce8428 hypothetical protein.
  
 
 0.471
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.