STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5656PFAM: ABC-type uncharacterized transport system; ABC-2 type transporter; KEGG: sfu:Sfum_1754 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (770 aa)    
Predicted Functional Partners:
Hoch_5657
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce2431 Sulfate/thiosulfate import ATP- binding protein CysA.
 
 
 0.966
Hoch_5380
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd1023 ATP-binding protein of ABC transporter.
 
 
 0.863
Hoch_6081
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1547 ABC transporter, ATP-binding protein.
 
 
 0.863
Hoch_5655
KEGG: SNF2 superfamily protein.
       0.773
Hoch_5658
PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; KEGG: scl:sce7931 sensor histidine kinase.
       0.773
Hoch_4658
PFAM: Di-haem cytochrome c peroxidase; KEGG: sse:Ssed_1107 cytochrome-c peroxidase.
  
 
 0.606
Hoch_6079
PFAM: ABC-type uncharacterized transport system; KEGG: scl:sce4423 hypothetical protein.
 
  
 0.606
Hoch_5654
Hypothetical protein.
       0.565
Hoch_2233
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce2431 Sulfate/thiosulfate import ATP- binding protein CysA.
 
 
 0.532
Hoch_2235
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_0670 ABC transporter related.
 
 
 0.530
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.