STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5818KEGG: mei:Msip34_0038 hypothetical protein. (300 aa)    
Predicted Functional Partners:
Hoch_5819
KEGG: bja:bll0118 hypothetical protein.
       0.757
Hoch_5667
KEGG: scl:sce1566 hypothetical protein.
  
     0.561
Hoch_6308
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; AAA ATPase; KEGG: scl:sce0538 protein kinase.
  
     0.530
Hoch_1370
PFAM: FAD dependent oxidoreductase; KEGG: plu:plu3567 hypothetical protein.
  
     0.512
Hoch_3046
PFAM: protein of unknown function DUF876; KEGG: pmy:Pmen_2318 hypothetical protein.
  
     0.511
Hoch_3050
PFAM: protein of unknown function DUF879; KEGG: vcj:VCD_000134 protein ImpG/VasA.
  
     0.503
Hoch_5820
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide repeat; KEGG: afw:Anae109_0937 TPR repeat-containing protein.
       0.483
Hoch_2525
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce3386 protein kinase.
  
     0.478
Hoch_4807
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce3386 protein kinase.
  
     0.477
Hoch_0571
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce3386 protein kinase.
  
     0.468
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.