STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_5938PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet2585 Put. ABC transport protein, inner membrane component. (294 aa)    
Predicted Functional Partners:
Hoch_5934
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3393 binding-protein-dependent transport systems inner membrane component.
 0.995
Hoch_5937
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB3057 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.995
Hoch_5936
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpi:Rpic_3328 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.993
Hoch_5939
PFAM: extracellular solute-binding protein family 1; KEGG: ppg:PputGB1_1898 extracellular solute-binding protein.
 
 0.992
Hoch_5153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00442 maltose transporter permease.
 
 0.917
Hoch_5935
PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: ppw:PputW619_1737 small integral membrane protein-like protein.
 
    0.917
Hoch_3144
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20327 trehalosemaltose transporter permease protein.
 
 0.840
Hoch_4323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psa:PST_2192 mannitol ABC transporter, permease protein.
 
 0.836
Hoch_5151
Extracellular solute-binding protein family 1; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
  
 
 0.804
Hoch_5155
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: psa:PST_3478 maltose/maltodextrin transporter ATP-binding protein.
 
 
 0.775
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.