STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_6182PFAM: Serine/threonine protein kinase-related; protein of unknown function DUF323; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce7451 protein kinase. (1314 aa)    
Predicted Functional Partners:
Hoch_3184
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: scl:sce5690 FHA domain-containing protein.
 
 
   0.787
Hoch_1566
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; SMART: WD-40 repeat protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: scl:sce_pseudo_02 pseudogene.
  
    0.773
Hoch_5572
KEGG: scl:sce1942 hypothetical protein.
  
     0.773
Hoch_5180
PFAM: band 7 protein; KEGG: scl:sce5384 membrane protease subunit stomatin/prohibitin-like protein.
  
     0.772
Hoch_2158
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: scl:sce5690 FHA domain-containing protein.
 
 
   0.768
Hoch_5515
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Tetratricopeptide TPR_4; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce5317 protein kinase.
  
    0.768
Hoch_1263
Putative transcriptional regulator, RpiR family; PFAM: protein of unknown function DUF1552; KEGG: mxa:MXAN_4109 hypothetical protein.
  
     0.747
Hoch_1264
PFAM: Protein of unknown function DUF1588; KEGG: mxa:MXAN_4108 putative lipoprotein.
  
     0.747
Hoch_1567
KEGG: mxa:MXAN_0141 SWIM zinc finger domain- containing protein.
  
     0.736
Hoch_6306
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: scl:sce5690 FHA domain-containing protein.
 
 
   0.735
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.