Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Hoch_1997 | Hoch_3868 | PFAM: protein of unknown function DUF1111; KEGG: vvy:VV2118 thiol oxidoreductase. | PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein. | 0.893 |
Hoch_1997 | Hoch_3870 | PFAM: protein of unknown function DUF1111; KEGG: vvy:VV2118 thiol oxidoreductase. | PFAM: Peptidase M75, Imelysin; KEGG: spl:Spea_0671 putative lipoprotein. | 0.865 |
Hoch_1997 | Hoch_6445 | PFAM: protein of unknown function DUF1111; KEGG: vvy:VV2118 thiol oxidoreductase. | Thiol oxidoreductase-like protein; KEGG: ppr:PBPRB1903 hypothetical protein. | 0.774 |
Hoch_3868 | Hoch_1997 | PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein. | PFAM: protein of unknown function DUF1111; KEGG: vvy:VV2118 thiol oxidoreductase. | 0.893 |
Hoch_3868 | Hoch_3870 | PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein. | PFAM: Peptidase M75, Imelysin; KEGG: spl:Spea_0671 putative lipoprotein. | 0.872 |
Hoch_3868 | Hoch_6445 | PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein. | Thiol oxidoreductase-like protein; KEGG: ppr:PBPRB1903 hypothetical protein. | 0.895 |
Hoch_3870 | Hoch_1997 | PFAM: Peptidase M75, Imelysin; KEGG: spl:Spea_0671 putative lipoprotein. | PFAM: protein of unknown function DUF1111; KEGG: vvy:VV2118 thiol oxidoreductase. | 0.865 |
Hoch_3870 | Hoch_3868 | PFAM: Peptidase M75, Imelysin; KEGG: spl:Spea_0671 putative lipoprotein. | PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein. | 0.872 |
Hoch_3870 | Hoch_6445 | PFAM: Peptidase M75, Imelysin; KEGG: spl:Spea_0671 putative lipoprotein. | Thiol oxidoreductase-like protein; KEGG: ppr:PBPRB1903 hypothetical protein. | 0.842 |
Hoch_6445 | Hoch_1997 | Thiol oxidoreductase-like protein; KEGG: ppr:PBPRB1903 hypothetical protein. | PFAM: protein of unknown function DUF1111; KEGG: vvy:VV2118 thiol oxidoreductase. | 0.774 |
Hoch_6445 | Hoch_3868 | Thiol oxidoreductase-like protein; KEGG: ppr:PBPRB1903 hypothetical protein. | PFAM: Peptidase M75, Imelysin; KEGG: dac:Daci_1525 putative iron-regulated protein. | 0.895 |
Hoch_6445 | Hoch_3870 | Thiol oxidoreductase-like protein; KEGG: ppr:PBPRB1903 hypothetical protein. | PFAM: Peptidase M75, Imelysin; KEGG: spl:Spea_0671 putative lipoprotein. | 0.842 |