STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoch_6773KEGG: scl:sce7899 phosphoprotein phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein. (254 aa)    
Predicted Functional Partners:
Hoch_2652
PFAM: Transketolase domain protein; dehydrogenase E1 component; Transketolase central region; KEGG: rhi:NGR_b11450 transketolase, central region.
  
 0.779
Hoch_6774
Hypothetical protein.
       0.773
Hoch_3609
Phage tail protein; KEGG: gsu:GSU0989 NHL repeat-containing protein; TIGRFAM: phage tail protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein.
  
 
 0.486
Hoch_2172
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_5116 serine/threonine protein kinase.
 
   0.457
Hoch_3883
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce0933 protein kinase.
 
   0.450
Hoch_6056
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_2911 serine/threonine kinase PKN11.
  
   0.450
Hoch_1504
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; Tetratricopeptide repeat; KEGG: mxa:MXAN_2738 serine/threonine kinase family protein.
 
   0.447
Hoch_0992
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PEGA domain protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_1929 MasK protein.
  
   0.442
Hoch_5416
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_4700 serine/threonine protein kinase.
   0.440
Hoch_1260
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; Tetratricopeptide repeat; KEGG: mxa:MXAN_1480 serine/threonine kinase family protein.
  
   0.438
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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