STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAZ14621.1Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
OAZ14623.1
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OAZ14622.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OAZ14253.1
Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
OAZ14258.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.917
OAZ10007.1
Nitrate transport permease nrtB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.900
OAZ14620.1
Catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.896
OAZ14970.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.876
OAZ12427.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.875
OAZ08349.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.868
OAZ10066.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     
0.855
Your Current Organism:
Thalassospira profundimaris
NCBI taxonomy Id: 502049
Other names: CGMCC 1.3997, DSM 17430, T. profundimaris, Thalassospira profundimaris Liu et al. 2007, Thalassospira sp. 35, Thalassospira sp. MCCC 1A00350, Thalassospira sp. MCCC 1A00385, Thalassospira sp. MCCC 1A01166, Thalassospira sp. MCCC 1A01318, Thalassospira sp. MCCC 1A02030, Thalassospira sp. PR54-5, Thalassospira sp. R4-5, Thalassospira sp. R8-17, Thalassospira sp. S25-3-2, strain WP0211
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