STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAZ12947.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)    
Predicted Functional Partners:
OAZ13021.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.969
OAZ12991.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
OAZ14083.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.903
OAZ08170.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.895
OAZ13471.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.879
OAZ14677.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.860
OAZ14214.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.835
OAZ14105.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.817
OAZ12739.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.815
OAZ14967.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.786
Your Current Organism:
Thalassospira profundimaris
NCBI taxonomy Id: 502049
Other names: CGMCC 1.3997, DSM 17430, T. profundimaris, Thalassospira profundimaris Liu et al. 2007, Thalassospira sp. 35, Thalassospira sp. MCCC 1A00350, Thalassospira sp. MCCC 1A00385, Thalassospira sp. MCCC 1A01166, Thalassospira sp. MCCC 1A01318, Thalassospira sp. MCCC 1A02030, Thalassospira sp. PR54-5, Thalassospira sp. R4-5, Thalassospira sp. R8-17, Thalassospira sp. S25-3-2, strain WP0211
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