STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAZ09601.1Preprotein translocase subunit TatC; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
OAZ13420.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.718
OAZ14083.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.540
OAZ13021.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.535
OAZ13439.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.533
OAZ13331.1
Polyketide biosynthesis dithiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.533
OAZ14707.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.520
OAZ08170.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.514
OAZ09600.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.501
OAZ13416.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.465
OAZ07906.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.407
Your Current Organism:
Thalassospira profundimaris
NCBI taxonomy Id: 502049
Other names: CGMCC 1.3997, DSM 17430, T. profundimaris, Thalassospira profundimaris Liu et al. 2007, Thalassospira sp. 35, Thalassospira sp. MCCC 1A00350, Thalassospira sp. MCCC 1A00385, Thalassospira sp. MCCC 1A01166, Thalassospira sp. MCCC 1A01318, Thalassospira sp. MCCC 1A02030, Thalassospira sp. PR54-5, Thalassospira sp. R4-5, Thalassospira sp. R8-17, Thalassospira sp. S25-3-2, strain WP0211
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