STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GspEPredicted ATPase involved in pili biogenesis; PilB homolog. (566 aa)    
Predicted Functional Partners:
HofF
General secretory pathway protein F.
 
 
 0.991
HofF-2
General secretory pathway protein F.
 
 
 0.964
PppA
Signal peptidase; Cleaves prepilin-like protein.
 
 
 0.945
BAK43382.1
Hypothetical protein.
 
 
 0.886
FtsA
Predicted ATPase of the HSP70 class involved in cell division.
 
 
 0.880
BAK43380.1
Hypothetical protein.
 
  
0.878
ComEC
Predicted hydrolase of metallo-beta-lactamase fold.
  
  
 0.837
BAK43375.1
RTX toxin; Related Ca2+-binding protein.
     
 0.794
BAK43376.1
Hypothetical protein.
       0.782
RpoB
DNA-directed RNA polymerase beta subunit; 140 kDa subunit (split gene in Mjan, Mthe, Aful).
       0.782
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.