Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ApaH | BAK45033.1 | EGYY_20830 | EGYY_19050 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Hypothetical protein. | 0.641 |
ApaH | BAK45131.1 | EGYY_20830 | EGYY_20410 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Hypothetical protein. | 0.785 |
ApaH | BAK45953.1 | EGYY_20830 | EGYY_29890 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Hypothetical protein. | 0.841 |
ApaH | RecJ | EGYY_20830 | EGYY_25950 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Single-stranded DNA-specific exonuclease. | 0.865 |
ApaH | TauB | EGYY_20830 | EGYY_04070 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, ATPase component. | 0.940 |
ApaH | polA | EGYY_20830 | EGYY_19930 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.980 |
ApaH | recA | EGYY_20830 | EGYY_14130 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Hypothetical protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.720 |
ApaH | topA | EGYY_20830 | EGYY_10740 | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | Hypothetical protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA sup [...] | 0.502 |
BAK43367.1 | BAK45033.1 | EGYY_01010 | EGYY_19050 | Hypothetical protein. | Hypothetical protein. | 0.643 |
BAK43367.1 | BAK45131.1 | EGYY_01010 | EGYY_20410 | Hypothetical protein. | Hypothetical protein. | 0.792 |
BAK43367.1 | BAK45953.1 | EGYY_01010 | EGYY_29890 | Hypothetical protein. | Hypothetical protein. | 0.857 |
BAK43367.1 | RecJ | EGYY_01010 | EGYY_25950 | Hypothetical protein. | Single-stranded DNA-specific exonuclease. | 0.908 |
BAK43367.1 | TauB | EGYY_01010 | EGYY_04070 | Hypothetical protein. | ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, ATPase component. | 0.967 |
BAK43367.1 | polA | EGYY_01010 | EGYY_19930 | Hypothetical protein. | Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.988 |
BAK43367.1 | recA | EGYY_01010 | EGYY_14130 | Hypothetical protein. | Hypothetical protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.806 |
BAK43367.1 | topA | EGYY_01010 | EGYY_10740 | Hypothetical protein. | Hypothetical protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA sup [...] | 0.546 |
BAK43629.1 | TauB | EGYY_04060 | EGYY_04070 | Hypothetical protein. | ABC-type nitrate/sulfonate/taurine/bicarbonate transport system, ATPase component. | 0.968 |
BAK45033.1 | ApaH | EGYY_19050 | EGYY_20830 | Hypothetical protein. | Diadenosine tetraphosphatase; Related serine/threonine protein phosphatase. | 0.641 |
BAK45033.1 | BAK43367.1 | EGYY_19050 | EGYY_01010 | Hypothetical protein. | Hypothetical protein. | 0.643 |
BAK45033.1 | BAK45953.1 | EGYY_19050 | EGYY_29890 | Hypothetical protein. | Hypothetical protein. | 0.787 |
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