Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AcrR-3 | AcrR-5 | EGYY_02280 | EGYY_04450 | Transcriptional regulator. | Transcriptional regulator. | 0.505 |
AcrR-3 | Pth | EGYY_02280 | EGYY_01950 | Transcriptional regulator. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.416 |
AcrR-5 | AcrR-3 | EGYY_04450 | EGYY_02280 | Transcriptional regulator. | Transcriptional regulator. | 0.505 |
AcrR-5 | ProP-3 | EGYY_04450 | EGYY_04480 | Transcriptional regulator. | Permease of the major facilitator superfamily. | 0.770 |
AcrR-5 | Pth | EGYY_04450 | EGYY_01950 | Transcriptional regulator. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.416 |
ProP-3 | AcrR-5 | EGYY_04480 | EGYY_04450 | Permease of the major facilitator superfamily. | Transcriptional regulator. | 0.770 |
Pth | AcrR-3 | EGYY_01950 | EGYY_02280 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Transcriptional regulator. | 0.416 |
Pth | AcrR-5 | EGYY_01950 | EGYY_04450 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Transcriptional regulator. | 0.416 |