STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAK44048.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
BAK44049.1
Hypothetical protein.
       0.568
BAK44638.1
Hypothetical protein.
 
     0.559
BAK45945.1
Hypothetical protein.
 
     0.545
BAK44047.1
Hypothetical protein.
 
   
 0.472
BAK44609.1
Hypothetical protein.
  
     0.459
BAK44608.1
Hypothetical protein.
 
     0.447
rho
Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
   
    0.439
BAK45943.1
Hypothetical protein.
  
     0.436
BAK44054.1
Hypothetical protein.
 
     0.412
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.