STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaiA-4acyl-CoA dehydrogenase. (402 aa)    
Predicted Functional Partners:
CaiD-2
enoyl-CoA hydratase; Carnithine racemase.
 
 0.814
FixB-5
Electron transfer flavoprotein alpha-subunit.
 
 0.763
FixB-2
Electron transfer flavoprotein alpha-subunit.
 
 0.752
FixB-4
Electron transfer flavoprotein alpha-subunit.
 
 0.751
FixB-3
Electron transfer flavoprotein alpha-subunit.
 
 0.707
FixB
Electron transfer flavoprotein alpha-subunit.
 
 0.699
BAK44963.1
Hypothetical protein.
 
 0.685
FixA-4
Electron transfer flavoprotein beta-subunit.
 
 
 0.669
BAK44929.1
Hypothetical protein.
 
 0.659
CaiD-4
enoyl-CoA hydratase; Carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.657
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.