STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HyaDNi,Fe-hydrogenase maturation factor. (192 aa)    
Predicted Functional Partners:
HyaB
Ni,Fe-hydrogenase I large subunit.
 
 
 0.951
HyaA
Ni,Fe-hydrogenase I small subunit.
 
  
 0.939
HyaC
Ni,Fe-hydrogenase I cytochrome b subunit.
 
  
 0.881
BAK44400.1
Hypothetical protein.
       0.855
BAK44379.1
Coenzyme F420-reducing hydrogenase, alpha subunit.
 
  
 0.580
BAK43415.1
Hypothetical protein.
 
   
 0.575
HybF
Zn finger protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.560
HypF
Hydrogenase maturation factor; Belongs to the acylphosphatase family.
 
   
 0.555
BAK45864.1
Hypothetical protein.
 
   
 0.550
BAK44184.1
Hypothetical protein.
     
 0.545
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.