STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NorM-2Na+-driven multidrug efflux pump. (245 aa)    
Predicted Functional Partners:
BAK44418.1
Hypothetical protein.
 
     0.793
Iap
Predicted aminopeptidase.
  
     0.753
BAK45105.1
Hypothetical protein.
  
     0.727
NapF-4
Ferredoxin 2.
 
     0.687
BAK43953.1
Predicted integral membrane protein.
 
     0.678
BAK44833.1
Hypothetical protein.
 
     0.675
NrfG-2
TPR-repeat-containing protein.
 
     0.674
BAK43450.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.661
BAK45072.1
DNA-binding transcriptional activator of the SARP family.
  
     0.624
gltX
Hypothetical protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.611
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
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