Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAK44959.1 | BAK45447.1 | EGYY_18240 | EGYY_23780 | Hypothetical protein. | Hypothetical protein. | 0.565 |
BAK44959.1 | FabG-4 | EGYY_18240 | EGYY_18220 | Hypothetical protein. | Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. | 0.408 |
BAK44959.1 | NemA-4 | EGYY_18240 | EGYY_18230 | Hypothetical protein. | NADH:flavin oxidoreductase; Old Yellow Enzyme family. | 0.540 |
BAK44959.1 | ProP-12 | EGYY_18240 | EGYY_18250 | Hypothetical protein. | Permease of the major facilitator superfamily. | 0.594 |
BAK44959.1 | ProP-8 | EGYY_18240 | EGYY_13300 | Hypothetical protein. | Permease of the major facilitator superfamily. | 0.746 |
BAK45447.1 | BAK44959.1 | EGYY_23780 | EGYY_18240 | Hypothetical protein. | Hypothetical protein. | 0.565 |
FabG-4 | BAK44959.1 | EGYY_18220 | EGYY_18240 | Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. | Hypothetical protein. | 0.408 |
FabG-4 | NemA-4 | EGYY_18220 | EGYY_18230 | Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. | NADH:flavin oxidoreductase; Old Yellow Enzyme family. | 0.574 |
NemA-4 | BAK44959.1 | EGYY_18230 | EGYY_18240 | NADH:flavin oxidoreductase; Old Yellow Enzyme family. | Hypothetical protein. | 0.540 |
NemA-4 | FabG-4 | EGYY_18230 | EGYY_18220 | NADH:flavin oxidoreductase; Old Yellow Enzyme family. | Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. | 0.574 |
NemA-4 | ProP-12 | EGYY_18230 | EGYY_18250 | NADH:flavin oxidoreductase; Old Yellow Enzyme family. | Permease of the major facilitator superfamily. | 0.429 |
ProP-12 | BAK44959.1 | EGYY_18250 | EGYY_18240 | Permease of the major facilitator superfamily. | Hypothetical protein. | 0.594 |
ProP-12 | NemA-4 | EGYY_18250 | EGYY_18230 | Permease of the major facilitator superfamily. | NADH:flavin oxidoreductase; Old Yellow Enzyme family. | 0.429 |
ProP-8 | BAK44959.1 | EGYY_13300 | EGYY_18240 | Permease of the major facilitator superfamily. | Hypothetical protein. | 0.746 |