Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAK44634.1 | HisA | EGYY_14840 | EGYY_20040 | Hypothetical protein. | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | 0.783 |
BAK44634.1 | HisD | EGYY_14840 | EGYY_20080 | Hypothetical protein. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.819 |
BAK44634.1 | HisF | EGYY_14840 | EGYY_20030 | Hypothetical protein. | Imidazoleglycerol-phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.807 |
BAK44634.1 | HisI | EGYY_14840 | EGYY_07380 | Hypothetical protein. | phosphoribosyl-ATP pyrophosphohydrolase; Belongs to the PRA-PH family. | 0.713 |
BAK44634.1 | HisI-2 | EGYY_14840 | EGYY_20020 | Hypothetical protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.810 |
BAK44634.1 | hisB | EGYY_14840 | EGYY_20050 | Hypothetical protein. | Hypothetical protein. | 0.815 |
BAK44634.1 | hisG | EGYY_14840 | EGYY_20090 | Hypothetical protein. | Hypothetical protein; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.990 |
HisA | BAK44634.1 | EGYY_20040 | EGYY_14840 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | Hypothetical protein. | 0.783 |
HisA | HisC | EGYY_20040 | EGYY_20070 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | Tyrosine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.931 |
HisA | HisD | EGYY_20040 | EGYY_20080 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.985 |
HisA | HisF | EGYY_20040 | EGYY_20030 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | Imidazoleglycerol-phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.999 |
HisA | HisI | EGYY_20040 | EGYY_07380 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | phosphoribosyl-ATP pyrophosphohydrolase; Belongs to the PRA-PH family. | 0.871 |
HisA | HisI-2 | EGYY_20040 | EGYY_20020 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.999 |
HisA | hisB | EGYY_20040 | EGYY_20050 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | Hypothetical protein. | 0.986 |
HisA | hisG | EGYY_20040 | EGYY_20090 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | Hypothetical protein; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.999 |
HisC | HisA | EGYY_20070 | EGYY_20040 | Tyrosine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide ProFAR isomerase. | 0.931 |
HisC | HisD | EGYY_20070 | EGYY_20080 | Tyrosine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.999 |
HisC | HisF | EGYY_20070 | EGYY_20030 | Tyrosine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Imidazoleglycerol-phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.928 |
HisC | HisI | EGYY_20070 | EGYY_07380 | Tyrosine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | phosphoribosyl-ATP pyrophosphohydrolase; Belongs to the PRA-PH family. | 0.767 |
HisC | HisI-2 | EGYY_20070 | EGYY_20020 | Tyrosine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.912 |
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