STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SerA-2Related dehydrogenase. (670 aa)    
Predicted Functional Partners:
BAK43299.1
Hypothetical protein.
   
 
 0.583
BAK44569.1
Hypothetical protein.
   
 
 0.583
BAK45231.1
Hypothetical protein; Belongs to the GHMP kinase family.
   
 
 0.551
BAK45233.1
Hypothetical protein.
     
 0.507
LacZ
Beta-galactosidase; Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
     
 0.502
BAK43764.1
Hypothetical protein.
  
 
 0.482
BAK45235.1
Hypothetical protein.
     
 0.476
BAK45236.1
Hypothetical protein.
     
 0.475
galT
Hypothetical protein.
     
 0.473
AcpP
Acyl carrier protein.
  
 
 0.469
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.