STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KatECatalase; Belongs to the catalase family. (518 aa)    
Predicted Functional Partners:
BAK45042.1
Hypothetical protein.
   
  
 0.926
msrA
Hypothetical protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.876
MaoC
Predicted acyl dehydratase.
   
 0.790
BAK45162.1
Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.784
DegQ-2
Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain.
  
 0.708
IlvB-2
Thiamine pyrophosphate-requiring enzyme; Acetolactate synthase, pyruvate dehydrogenase (cytochrome); Belongs to the TPP enzyme family.
  
 0.703
BAK44968.1
Hypothetical protein.
  
 0.703
Icd
Isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.689
NemA-2
NADH:flavin oxidoreductase; Old Yellow Enzyme family.
  
 
 0.607
NemA-5
NADH:flavin oxidoreductase; Old Yellow Enzyme family.
  
 
 0.607
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.