STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAK45538.1Hypothetical protein. (504 aa)    
Predicted Functional Partners:
CitB-8
Response regulator; Containing a CheY-like receiver domain,HTH DNA-binding domain.
 
   0.778
BAK45537.1
Hypothetical protein.
       0.773
CsgD-22
DNA-binding HTH domain-containing protein.
  
     0.749
BAK43561.1
Hypothetical protein.
 
   0.745
NlpD-2
Membrane protein related to metalloendopeptidase.
       0.714
CsgD-12
DNA-binding HTH domain-containing protein.
  
     0.627
CsgD-4
DNA-binding HTH domain-containing protein.
  
     0.579
BacA
Uncharacterized ACR; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.549
BAK45638.1
Hypothetical protein.
 
 
 0.529
BAK44456.1
Hypothetical protein.
 
 
 0.523
Your Current Organism:
Eggerthella sp. YY7918
NCBI taxonomy Id: 502558
Other names: E. sp. YY7918
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.