Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APE27040.1 | APE27041.1 | BMF35_a0211 | BMF35_a0212 | Transcriptional regulator. | Phage-related lysozyme (muraminidase). | 0.540 |
APE27040.1 | APE27042.1 | BMF35_a0211 | BMF35_a0213 | Transcriptional regulator. | PE_PGRS family protein. | 0.405 |
APE27040.1 | APE27043.1 | BMF35_a0211 | BMF35_a0214 | Transcriptional regulator. | Secreted and surface protein containing fasciclin-like repeats. | 0.403 |
APE27041.1 | APE27040.1 | BMF35_a0212 | BMF35_a0211 | Phage-related lysozyme (muraminidase). | Transcriptional regulator. | 0.540 |
APE27041.1 | APE27042.1 | BMF35_a0212 | BMF35_a0213 | Phage-related lysozyme (muraminidase). | PE_PGRS family protein. | 0.574 |
APE27041.1 | APE27043.1 | BMF35_a0212 | BMF35_a0214 | Phage-related lysozyme (muraminidase). | Secreted and surface protein containing fasciclin-like repeats. | 0.634 |
APE27042.1 | APE27040.1 | BMF35_a0213 | BMF35_a0211 | PE_PGRS family protein. | Transcriptional regulator. | 0.405 |
APE27042.1 | APE27041.1 | BMF35_a0213 | BMF35_a0212 | PE_PGRS family protein. | Phage-related lysozyme (muraminidase). | 0.574 |
APE27042.1 | APE27043.1 | BMF35_a0213 | BMF35_a0214 | PE_PGRS family protein. | Secreted and surface protein containing fasciclin-like repeats. | 0.768 |
APE27043.1 | APE27040.1 | BMF35_a0214 | BMF35_a0211 | Secreted and surface protein containing fasciclin-like repeats. | Transcriptional regulator. | 0.403 |
APE27043.1 | APE27041.1 | BMF35_a0214 | BMF35_a0212 | Secreted and surface protein containing fasciclin-like repeats. | Phage-related lysozyme (muraminidase). | 0.634 |
APE27043.1 | APE27042.1 | BMF35_a0214 | BMF35_a0213 | Secreted and surface protein containing fasciclin-like repeats. | PE_PGRS family protein. | 0.768 |