STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE27676.1Hypothetical protein; FIG00985688. (209 aa)    
Predicted Functional Partners:
APE27675.1
Hypothetical protein.
 
     0.939
APE27678.1
Glycerophosphoryl diester phosphodiesterase.
 
     0.846
APE27677.1
Endoribonuclease L-PSP.
  
    0.827
APE27679.1
Hypothetical protein; FIG110192.
       0.815
APE28756.1
Hypothetical protein; FIG00636985.
  
     0.759
APE28220.1
Transcriptional regulator, TetR family.
  
     0.729
APE27070.1
Flp pilus assembly protein CpaD.
  
     0.715
APE29266.1
Putative lipoprotein transmembrane.
  
     0.687
APE29466.1
Hypothetical protein.
  
     0.666
APE27680.1
Hypothetical protein; FIG00636121.
  
     0.654
Your Current Organism:
Erythrobacter gangjinensis
NCBI taxonomy Id: 502682
Other names: CGMCC 1.15024, E. gangjinensis, Erythrobacter gangjinensis Lee et al. 2010, Erythrobacter sp. K7-2, JCM 15420, KCTC 22330, strain K7-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.