STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE28109.1Hydroxymethylglutaryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (274 aa)    
Predicted Functional Partners:
APE28110.1
Putative transcriptional regulator.
 
 
 0.991
APE28630.1
Acetolactate synthase small subunit.
     
  0.900
APE28631.1
Acetolactate synthase large subunit.
     
  0.900
APE29116.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
     
  0.900
APE28112.1
CAIB/BAIF family protein; Belongs to the CoA-transferase III family.
 
  
 0.812
APE28113.1
Alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
 
  
 0.810
APE28111.1
Butyryl-CoA dehydrogenase.
  
    0.773
APE29045.1
Class II aldolase/adducin domain protein.
   
    0.706
APE27944.1
Acyl dehydratase; FIG00820637.
 
  
 0.624
APE28108.1
Hypothetical protein.
       0.537
Your Current Organism:
Erythrobacter gangjinensis
NCBI taxonomy Id: 502682
Other names: CGMCC 1.15024, E. gangjinensis, Erythrobacter gangjinensis Lee et al. 2010, Erythrobacter sp. K7-2, JCM 15420, KCTC 22330, strain K7-2
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