STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE29082.1Hypothetical protein; FIG00636561. (330 aa)    
Predicted Functional Partners:
APE29063.1
Glycosyl transferase, group 1 family protein.
 
     0.812
APE27307.1
Hypothetical protein; FIG00636485.
 
    0.791
APE29081.1
Hypothetical protein; FIG00636991.
 
     0.765
APE28873.1
Lipopolysaccharide biosynthesis chain length determinant protein.
  
    0.745
APE28868.1
Hypothetical protein; FIG070318.
 
     0.729
APE28866.1
Eight transmembrane protein EpsH / EpsI protein.
  
     0.719
APE27295.1
Hypothetical protein; FIG00635939.
 
     0.703
APE28877.1
Hypothetical protein.
 
     0.698
APE28599.1
Sensory transduction histidine kinase.
  
     0.691
APE28869.1
Polysaccharide deacetylase; FIG004655.
  
     0.688
Your Current Organism:
Erythrobacter gangjinensis
NCBI taxonomy Id: 502682
Other names: CGMCC 1.15024, E. gangjinensis, Erythrobacter gangjinensis Lee et al. 2010, Erythrobacter sp. K7-2, JCM 15420, KCTC 22330, strain K7-2
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