STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE29294.1Hypothetical protein; FIG00636751. (264 aa)    
Predicted Functional Partners:
APE29293.1
Hypothetical protein; FIG00636148.
 
   
 0.718
APE29122.1
Hypothetical protein; FIG00636318.
  
     0.557
APE29297.1
Histone deacetylase family protein.
       0.526
APE29298.1
Putative protein disulfide isomerase.
       0.510
APE27016.1
Cell division protein MraZ; Belongs to the MraZ family.
  
     0.445
APE29296.1
Transporter.
       0.443
APE29295.1
Hypothetical protein.
       0.429
APE29299.1
Hypothetical protein.
       0.424
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.419
APE28499.1
Muramoyltetrapeptide carboxypeptidase.
  
   
 0.410
Your Current Organism:
Erythrobacter gangjinensis
NCBI taxonomy Id: 502682
Other names: CGMCC 1.15024, E. gangjinensis, Erythrobacter gangjinensis Lee et al. 2010, Erythrobacter sp. K7-2, JCM 15420, KCTC 22330, strain K7-2
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