Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APE26855.1 | APE27086.1 | BMF35_a0026 | BMF35_a0257 | Sensor histidine kinase. | Hypothetical protein. | 0.530 |
APE26855.1 | APE27272.1 | BMF35_a0026 | BMF35_a0443 | Sensor histidine kinase. | GGDEF domain protein. | 0.976 |
APE26855.1 | APE27313.1 | BMF35_a0026 | BMF35_a0484 | Sensor histidine kinase. | Osmosensitive K+ channel histidine kinase KdpD. | 0.993 |
APE26855.1 | APE28029.1 | BMF35_a0026 | BMF35_a1200 | Sensor histidine kinase. | Sensory box sensor histidine kinase/response regulator. | 0.985 |
APE26855.1 | APE28072.1 | BMF35_a0026 | BMF35_a1243 | Sensor histidine kinase. | Chemotaxis protein methyltransferase CheR. | 0.967 |
APE26855.1 | APE28274.1 | BMF35_a0026 | BMF35_a1445 | Sensor histidine kinase. | GGDEF domain protein. | 0.951 |
APE26855.1 | APE28622.1 | BMF35_a0026 | BMF35_a1793 | Sensor histidine kinase. | Sensor histidine kinase/response regulator. | 0.985 |
APE26855.1 | APE29032.1 | BMF35_a0026 | BMF35_a2203 | Sensor histidine kinase. | Putative two-component sensor. | 0.986 |
APE26855.1 | APE29085.1 | BMF35_a0026 | BMF35_a2256 | Sensor histidine kinase. | Hypothetical protein. | 0.530 |
APE26855.1 | APE29303.1 | BMF35_a0026 | BMF35_b0048 | Sensor histidine kinase. | EAL domain protein. | 0.747 |
APE27086.1 | APE26855.1 | BMF35_a0257 | BMF35_a0026 | Hypothetical protein. | Sensor histidine kinase. | 0.530 |
APE27086.1 | APE27272.1 | BMF35_a0257 | BMF35_a0443 | Hypothetical protein. | GGDEF domain protein. | 0.429 |
APE27086.1 | APE27313.1 | BMF35_a0257 | BMF35_a0484 | Hypothetical protein. | Osmosensitive K+ channel histidine kinase KdpD. | 0.512 |
APE27086.1 | APE28029.1 | BMF35_a0257 | BMF35_a1200 | Hypothetical protein. | Sensory box sensor histidine kinase/response regulator. | 0.627 |
APE27086.1 | APE28072.1 | BMF35_a0257 | BMF35_a1243 | Hypothetical protein. | Chemotaxis protein methyltransferase CheR. | 0.493 |
APE27086.1 | APE28274.1 | BMF35_a0257 | BMF35_a1445 | Hypothetical protein. | GGDEF domain protein. | 0.470 |
APE27086.1 | APE28622.1 | BMF35_a0257 | BMF35_a1793 | Hypothetical protein. | Sensor histidine kinase/response regulator. | 0.852 |
APE27086.1 | APE29032.1 | BMF35_a0257 | BMF35_a2203 | Hypothetical protein. | Putative two-component sensor. | 0.548 |
APE27086.1 | APE29303.1 | BMF35_a0257 | BMF35_b0048 | Hypothetical protein. | EAL domain protein. | 0.897 |
APE27272.1 | APE26855.1 | BMF35_a0443 | BMF35_a0026 | GGDEF domain protein. | Sensor histidine kinase. | 0.976 |
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