STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE29372.1Hypothetical protein; FIG00636999. (441 aa)    
Predicted Functional Partners:
APE29373.1
Hypothetical protein.
 
    
0.868
APE28688.1
Membrane protein, putative.
  
     0.637
APE29374.1
Proteorhodopsin.
 
     0.610
APE29282.1
Hypothetical protein.
 
     0.522
APE27037.1
Na+/H+ antiporter, CPA1 family.
 
     0.504
APE29089.1
Conserved hypothetical protein-putative membrane protein.
 
     0.471
APE29375.1
Hypothetical protein; Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal. Belongs to the Brp/Blh beta-carotene diooxygenase family.
       0.464
APE26943.1
Beta-carotene ketolase.
  
     0.453
APE27439.1
Hypothetical protein; FIG00637285.
  
     0.439
APE27708.1
Small-conductance mechanosensitive channel.
 
     0.408
Your Current Organism:
Erythrobacter gangjinensis
NCBI taxonomy Id: 502682
Other names: CGMCC 1.15024, E. gangjinensis, Erythrobacter gangjinensis Lee et al. 2010, Erythrobacter sp. K7-2, JCM 15420, KCTC 22330, strain K7-2
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