STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE29466.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
APE28890.1
Uracil-DNA glycosylase.
  
     0.756
APE29367.1
Hypothetical protein; FIG00636163.
  
     0.752
APE28877.1
Hypothetical protein.
  
     0.746
APE27016.1
Cell division protein MraZ; Belongs to the MraZ family.
  
     0.738
APE29309.1
Hypothetical protein; FIG00483574.
  
     0.735
APE28231.1
GTP-binding protein EngA.
  
     0.729
APE29096.1
ATP-dependent RNA helicase.
  
    0.698
APE29229.1
Hypothetical protein.
  
     0.698
APE28220.1
Transcriptional regulator, TetR family.
  
     0.695
APE27070.1
Flp pilus assembly protein CpaD.
  
     0.685
Your Current Organism:
Erythrobacter gangjinensis
NCBI taxonomy Id: 502682
Other names: CGMCC 1.15024, E. gangjinensis, Erythrobacter gangjinensis Lee et al. 2010, Erythrobacter sp. K7-2, JCM 15420, KCTC 22330, strain K7-2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.