STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_00652Helicase ATP-binding domain-containing protein. (645 aa)    
Predicted Functional Partners:
PAAG_07894
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.709
PAAG_03311
DNA damage-inducible protein DIN7.
    
 
 0.688
PAAG_00461
Uncharacterized protein.
  
 
 0.611
PAAG_02129
Uncharacterized protein.
  
 
 
 0.601
PAAG_01234
DNA repair protein RAD16.
  
   0.600
PAAG_00617
Uncharacterized protein.
  
   0.599
PAAG_02795
DNA replication ATP-dependent helicase dna2.
    
 
 0.598
PAAG_02525
DNA repair protein rad5.
  
   0.597
PAAG_05045
SNF2 family N-terminal domain containing protein.
  
 
 
 0.594
PAAG_00883
ATP-dependent DNA helicase.
  
 
 0.537
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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